Genomics Clinical Picture Repository Implementation Guide
0.1.0 - ci-build
Genomics Clinical Picture Repository Implementation Guide - Local Development build (v0.1.0). See the Directory of published versions
| Official URL: http://aehrc.github.io/genclipr-fhir-ig/ValueSet/GenomicTestTypes | Version: 0.1.0 | |||
| Active as of 2022-03-21 | Computable Name: GenomicTestTypes | |||
Copyright/Legal: Australian Genomics |
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Genomic test types, including research tests.
References
This value set includes codes based on the following rules:
http://aehrc.github.io/genclipr-fhir-ig/CodeSystem/GenomicTestTypehttp://loinc.org| Code | Display |
| 86205-2 | Whole exome sequence analysis in Blood or Tissue by Molecular genetics method |
| 86206-0 | Whole genome sequence analysis in Blood or Tissue by Molecular genetics method |
This value set contains 6 concepts
Expansion based on:
| Code | System | Display | Definition |
| TEST:001 | http://aehrc.github.io/genclipr-fhir-ig/CodeSystem/GenomicTestType | Gene Panel | Panel tests look for variants in more than one gene. |
| TEST:002 | http://aehrc.github.io/genclipr-fhir-ig/CodeSystem/GenomicTestType | Research Exome | A whole exome sequencing test done in a research context. |
| TEST:003 | http://aehrc.github.io/genclipr-fhir-ig/CodeSystem/GenomicTestType | Research Genome | A whole genome sequencing test done in a research context. |
| TEST:004 | http://aehrc.github.io/genclipr-fhir-ig/CodeSystem/GenomicTestType | Research RNA-seq | An RNA sequencing test done in a research context. |
| 86205-2 | http://loinc.org | Whole exome sequence analysis in Blood or Tissue by Molecular genetics method | |
| 86206-0 | http://loinc.org | Whole genome sequence analysis in Blood or Tissue by Molecular genetics method |
Explanation of the columns that may appear on this page:
| Level | A few code lists that FHIR defines are hierarchical - each code is assigned a level. In this scheme, some codes are under other codes, and imply that the code they are under also applies |
| System | The source of the definition of the code (when the value set draws in codes defined elsewhere) |
| Code | The code (used as the code in the resource instance) |
| Display | The display (used in the display element of a Coding). If there is no display, implementers should not simply display the code, but map the concept into their application |
| Definition | An explanation of the meaning of the concept |
| Comments | Additional notes about how to use the code |